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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13328163_13328441_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13328163 - 13328441

Intron Length:

279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGGGTTTT

5'SS Class:

major

3'SS Sequence:

GTTCTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAA

U12 Branch Point Sequence:

AAAGCTGTAACA

Flanking Amino Acid:

NILNSVQEQTEKSLSSDEQA

Intron Amino Acid Position:

433

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

76.6

34.9

Major BPS

55.5

0.14

1.1

47.1

37.9

Major PPT

84.5

0.78

0.8

81.3

30.7

Minor 5ss

39.4

-1.2

3.3

54.1

45.6

Minor BPS

48.5

-0.1

2.1

59.47

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005491

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005714

13323975 - 13335250

11276