Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_13411028_13411319_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13411028 - 13411319

Intron Length:

292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAGGTT

5'SS Class:

major

3'SS Sequence:

TCTTCTGCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAGAT

U12 Branch Point Sequence:

TAGATCAGAAAT

Flanking Amino Acid:

KSNFFIIHIAGSELYDIQLY

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

0.9

75.4

34.2

Major BPS

62.6

0.31

58.7

38.1

Major PPT

0.56

0.9

74.3

35.2

Minor 5ss

29.1

-2.4

3.8

45.9

49.3

Minor BPS

44.9

-0.3

1.8

61.28

41.6

Associated Gene:

Gene:

FLT4

Ensembl Gene ID:

ENSAPLG00000005955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006166

13399288 - 13432652

33365