Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_13425547_13426112_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13425547 - 13426112

Intron Length:

566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATACCC

5'SS Class:

major

3'SS Sequence:

TGCTCCTGGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

CACTGTCTAACC

Flanking Amino Acid:

KSQTAQPIQEVDDLWQSPLT

Intron Amino Acid Position:

1007

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.68

65.3

38.9

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

64.4

0.33

1.1

61.2

40.1

Minor 5ss

33.3

-1.9

43.9

43.3

Minor BPS

46.3

-0.3

2.1

55.48

43.1

Associated Gene:

Gene:

FLT4

Ensembl Gene ID:

ENSAPLG00000005955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006166

13399288 - 13432652

33365