Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_13526353_13527136_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13526353 - 13527136

Intron Length:

784

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTTGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATGAT

U12 Branch Point Sequence:

TTGTCTTTGAAA

Flanking Amino Acid:

TIKDLPKMSQEQFIELCKTL

Intron Amino Acid Position:

882

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

66.9

0.42

1.3

59.7

46.7

Major PPT

67.3

0.39

1.2

70.7

39.1

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

68.2

0.57

1.4

75.09

36.4

Associated Gene:

Gene:

TBC1D9B

Ensembl Gene ID:

ENSAPLG00000008106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015385

13510027 - 13527561

17535

ENSAPLT00000008473

13510027 - 13527561

17535