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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13542033_13543155_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13542033 - 13543155

Intron Length:

1123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTACGGGAC

5'SS Class:

major

3'SS Sequence:

CTATCTCTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTCTAT

U12 Branch Point Sequence:

TGGACAAGAAAC

Flanking Amino Acid:

EAEEAIARTARCIEECVNDN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

58.9

40.5

Major BPS

56.1

0.15

1.5

58.5

47.9

Major PPT

74.9

0.56

0.8

73.5

31.2

Minor 5ss

28.9

-2.4

3.7

40.7

Minor BPS

40.1

-0.7

1.9

49.18

39.5

Associated Gene:

Gene:

MRNIP

Ensembl Gene ID:

ENSAPLG00000008639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028124

13541631 - 13545569

3939

ENSAPLT00000008977

13541631 - 13544823

3193