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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13543226_13543532_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13543226 - 13543532

Intron Length:

307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

TCCAATGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

TTTTTAGTAATT

Flanking Amino Acid:

AHGEESSVQQEGRVEVSRWS

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

81.2

26.3

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

67.5

0.39

61.2

39.7

Minor 5ss

38.2

-1.3

3.1

49.9

46.6

Minor BPS

57.1

0.3

2.2

84.39

36.6

Associated Gene:

Gene:

MRNIP

Ensembl Gene ID:

ENSAPLG00000008639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028124

13541631 - 13545569

3939

ENSAPLT00000008977

13541631 - 13544823

3193