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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13563843_13630197_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13563843 - 13630197

Intron Length:

66355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTTTC

5'SS Class:

major

3'SS Sequence:

ACAGCCCCATCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAGTCAC

U12 Branch Point Sequence:

CTGACAGTCACA

Flanking Amino Acid:

PPMIDNVNYQGIWARRRSSP

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

74.3

37.2

Major BPS

54.8

0.12

1.2

58.7

38.1

Major PPT

0.16

52.7

37.1

Minor 5ss

39.7

-1.2

52.8

44.4

Minor BPS

39.8

-0.8

2.5

52.7

45.3

Associated Gene:

Gene:

CANX

Ensembl Gene ID:

ENSAPLG00000009588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010041

13563489 - 13637214

73726