Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_13585887_13588395_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13585887 - 13588395

Intron Length:

2509

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTACGTAAA

5'SS Class:

major

3'SS Sequence:

TTTCCCGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGACAC

U12 Branch Point Sequence:

CACTGGGGGATT

Flanking Amino Acid:

VKVCNPEKDAKHCDRQKANL

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.1

68.4

38.3

Major BPS

57.7

0.19

1.2

66.7

Major PPT

83.6

0.76

0.8

80.8

31.1

Minor 5ss

36.2

-1.6

47.1

42.6

Minor BPS

30.4

-1.4

2.5

43.33

41.5

Associated Gene:

Gene:

MGAT4B

Ensembl Gene ID:

ENSAPLG00000008886

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026690

13573799 - 13590796

16998

ENSAPLT00000009297

13576662 - 13590796

14135