Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_13589690_13590148_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13589690 - 13590148

Intron Length:

459

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTCCATCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAT

U12 Branch Point Sequence:

CAGTCCTGAGCA

Flanking Amino Acid:

NTTVEVLPFDSLQSDKETLQ

Intron Amino Acid Position:

462

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

1.2

85.2

32.2

Major BPS

64.7

0.37

1.3

74.7

Major PPT

71.2

0.48

0.8

64.4

30.7

Minor 5ss

-1.1

3.4

57.4

40.7

Minor BPS

52.8

0.08

1.8

61.59

44.2

Associated Gene:

Gene:

MGAT4B

Ensembl Gene ID:

ENSAPLG00000008886

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026690

13573799 - 13590796

16998

ENSAPLT00000009297

13576662 - 13590796

14135