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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13657088_13659624_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13657088 - 13659624

Intron Length:

2537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

GCACTGCCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

CTGGTTTTAAGC

Flanking Amino Acid:

MRSLSASQLKDLSCSIRASL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

73.2

39.3

Major BPS

75.6

0.64

1.5

34.5

Major PPT

66.1

0.36

57.3

38.5

Minor 5ss

40.1

-1.1

2.8

44.4

43.5

Minor BPS

49.2

-0

1.7

56.36

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018622

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028242

13657057 - 13662219

5163