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Intron Name: Anas_platyrhynchos_platyrhynchos_14_1368323_1409401_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1368323 - 1409401

Intron Length:

41079

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TCCTGTTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTTAA

U12 Branch Point Sequence:

TGTATCTTAACT

Flanking Amino Acid:

EQNCTLEIESYGYTTDDIEF

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

77.8

36.6

Major BPS

73.4

0.58

0.9

63.7

35.1

Major PPT

80.4

0.68

0.8

75.5

33.1

Minor 5ss

41.3

-1

2.8

62.9

Minor BPS

79.6

1.01

1.2

89.45

34.4

Associated Gene:

Gene:

GABRB2

Ensembl Gene ID:

ENSAPLG00000013041

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041017

1339234 - 1574652

235419

ENSAPLT00000037347

1337553 - 1497996

160444

ENSAPLT00000022851

1339234 - 1497996

158763

ENSAPLT00000013571

1339234 - 1483298

144065

ENSAPLT00000045901

1337553 - 1497996

160444