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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13685039_13685251_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13685039 - 13685251

Intron Length:

213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGCGTGCG

5'SS Class:

weak_major

3'SS Sequence:

TGGTTTTCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAA

U12 Branch Point Sequence:

AGCGTCTCAAAG

Flanking Amino Acid:

MSTTETEAEPN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.5

0.2

1.2

49.9

41.1

Major BPS

0.45

1.2

71.6

36.4

Major PPT

81.6

0.71

0.9

73.6

41.8

Minor 5ss

28.5

-2.5

3.3

32.6

42.1

Minor BPS

44.5

-0.5

1.7

43.54

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019851

13684814 - 13692088

7275