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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13689721_13689820_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13689721 - 13689820

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATACAT

U12 Branch Point Sequence:

TACATCTGAAAG

Flanking Amino Acid:

YGFGSDRFGRGMSDHRYGDG

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.1

Major BPS

66.1

0.4

31.5

Major PPT

85.5

0.8

0.7

80.5

24.8

Minor 5ss

30.9

-2.2

3.6

45.9

49.3

Minor BPS

48.1

-0.2

1.6

51.39

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043866

13684188 - 13692436

8249

ENSAPLT00000019851

13684814 - 13692088

7275