Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_13689934_13690106_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13689934 - 13690106

Intron Length:

173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTTCC

5'SS Class:

major

3'SS Sequence:

GTTTTGCATGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGCGTTTTAATC

Flanking Amino Acid:

YRATENDIYNFFSPLNPVRV

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.3

71.9

34.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.2

0.5

39.6

Minor 5ss

37.4

-1.4

2.8

44.3

36.5

Minor BPS

58.4

0.24

1.4

61.57

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043866

13684188 - 13692436

8249

ENSAPLT00000019851

13684814 - 13692088

7275

ENSAPLT00000010798

13684188 - 13693072

8885

ENSAPLT00000046459

13684188 - 13692432

8245