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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13690653_13691703_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13690653 - 13691703

Intron Length:

1051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATATAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTAACTTAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

GTATCCTTAACT

Flanking Amino Acid:

VQDWNTSTLPGSQSSYGGPA

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

78.3

30.6

Major BPS

78.2

0.7

77.9

32.1

Major PPT

60.1

0.23

1.1

60.5

39.1

Minor 5ss

40.5

-1.1

2.7

50.4

46.1

Minor BPS

88.3

1.28

0.9

94.24

32.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046459

13684188 - 13692432

8245

ENSAPLT00000019851

13684814 - 13692088

7275

ENSAPLT00000010798

13684188 - 13693072

8885