Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_13691797_13692043_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13691797 - 13692043

Intron Length:

247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCACTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAC

U12 Branch Point Sequence:

ATTTCTTCACTT

Flanking Amino Acid:

YGGQSSMSGYEWMLQTNLV*

Intron Amino Acid Position:

437

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

33.4

Major BPS

77.5

0.68

79.6

Major PPT

82.9

0.74

0.8

35.7

Minor 5ss

30.9

-2.2

3.3

36.6

41.5

Minor BPS

0.33

1.8

78.23

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019851

13684814 - 13692088

7275

ENSAPLT00000046459

13684188 - 13692432

8245