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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13770292_13832333_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
13770292 - 13832333

Intron Length:
62042

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAAGTTAC

5'SS Class:
strong_major

3'SS Sequence:
CTTGTTGCTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CACTAAC

U12 Branch Point Sequence:
CTAACACAAAAT

Flanking Amino Acid:
SVAISNCDGLAGMIRTDKDE

Intron Amino Acid Position:
152

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.7
0.91
0.8
80.2
28.3

Major BPS
64.5
0.36
1
65.2
28.2

Major PPT
78.1
0.63
0.9
69.3
41.8

Minor 5ss
40.6
-1
2.8
49.4
41.4

Minor BPS
39.6
-0.7
2.1
57.14
44.4

Associated Gene:

Gene:
ADAMTS2

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13769157 - 13940855
171699