Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_13926892_13927535_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13926892 - 13927535

Intron Length:

644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGCG

5'SS Class:

major

3'SS Sequence:

TATTGCAATAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATCTTTTTAAAT

Flanking Amino Acid:

GTFSRVPKKQGHIKMFEIPV

Intron Amino Acid Position:

712

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

1.3

69.7

41.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

58.9

0.2

1.2

57.8

41.2

Minor 5ss

28.4

-2.5

2.9

33.2

41.8

Minor BPS

68.2

0.65

1.3

78.79

37.6

Associated Gene:

Gene:

ADAMTS2

Ensembl Gene ID:

ENSAPLG00000012527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013055

13769157 - 13940855

171699