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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13970469_13971425_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13970469 - 13971425

Intron Length:

957

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCTATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

TCTCTCCTATCA

Flanking Amino Acid:

CADLNSLPDSGVVEYLSTGG

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

33.4

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

0.65

0.8

78.1

29.1

Minor 5ss

30.9

-2.2

3.3

36.6

41.5

Minor BPS

-0

1.9

65.03

41.3

Associated Gene:

Gene:

CNOT6

Ensembl Gene ID:

ENSAPLG00000012715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013250

13969374 - 13996335

26962