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Intron Name: Anas_platyrhynchos_platyrhynchos_14_14080162_14080840_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
14080162 - 14080840

Intron Length:
679

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGT|GTAAGTACT

5'SS Class:
major

3'SS Sequence:
TCTTATGCTTTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTTAT

U12 Branch Point Sequence:
TCTTTCTTATGC

Flanking Amino Acid:
PQKSLEEFQDVYLVMELMDA

Intron Amino Acid Position:
104

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.4
0.62
1.1
77.4
37.4

Major BPS
91.4
1.03
0.7
79.9
34.9

Major PPT
76
0.59
0.9
73.8
36.5

Minor 5ss
40.4
-1.1
2.8
53.8
42.8

Minor BPS
57.1
0.2
1.9
69.18
42.9

Associated Gene:

Gene:
MAPK9

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14074726 - 14091115
16390