Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_14089211_14090109_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14089211 - 14090109

Intron Length:

899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACAAG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTTATCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

TTCCTCTTATCA

Flanking Amino Acid:

EREHAIEEWKELIYKEVMDW

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

71.2

40.6

Major BPS

0.5

1.1

71.2

35.2

Major PPT

81.4

0.71

0.8

81.4

Minor 5ss

38.1

-1.3

47.8

47.9

Minor BPS

62.8

0.4

1.6

72.17

Associated Gene:

Gene:

MAPK9

Ensembl Gene ID:

ENSAPLG00000013460

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014054

14074726 - 14091115

16390