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Intron Name: Anas_platyrhynchos_platyrhynchos_14_1409485_1439902_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1409485 - 1439902

Intron Length:

30418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAA

U12 Branch Point Sequence:

GACACGTTAACA

Flanking Amino Acid:

HPDGTVLYGLRITTTAACMM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

1.2

80.7

33.8

Major BPS

61.8

0.29

1.1

69.7

35.6

Major PPT

83.6

0.76

0.7

77.5

31.2

Minor 5ss

31.4

-2.1

2.4

35.4

40.5

Minor BPS

51.6

0.05

2.1

62.19

43.5

Associated Gene:

Gene:

GABRB2

Ensembl Gene ID:

ENSAPLG00000013041

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029832

1339234 - 1497996

158763

ENSAPLT00000022851

1339234 - 1497996

158763

ENSAPLT00000045901

1337553 - 1497996

160444

ENSAPLT00000013571

1339234 - 1483298

144065

ENSAPLT00000041017

1339234 - 1574652

235419

ENSAPLT00000037347

1337553 - 1497996

160444