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Intron Name: Anas_platyrhynchos_platyrhynchos_14_14270464_14270877_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14270464 - 14270877

Intron Length:

414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTATAGAAC

5'SS Class:

major

3'SS Sequence:

TTGTTCTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TGTTGCATAATT

Flanking Amino Acid:

CESGDVLRARYEIVATLGEG

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.6

0.27

1.1

61.1

37.3

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

0.81

0.7

85.4

29.4

Minor 5ss

40.4

-1.1

3.2

54.9

43.2

Minor BPS

59.4

0.37

81.75

39.8

Associated Gene:

Gene:

CLK4

Ensembl Gene ID:

ENSAPLG00000014787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015477

14267045 - 14275998

8954

ENSAPLT00000047253

14268309 - 14275998

7690