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Intron Name: Anas_platyrhynchos_platyrhynchos_14_14274363_14274688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14274363 - 14274688

Intron Length:

326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTCAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

GCCTGTTTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

AATATATTAAAA

Flanking Amino Acid:

RHYRAPEVILALGWSQPCDV

Intron Amino Acid Position:

369

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

38.6

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

78.3

0.64

0.9

71.9

Minor 5ss

30.5

-2.2

2.5

34.7

40.9

Minor BPS

50.7

0.02

1.7

62.5

36.5

Associated Gene:

Gene:

CLK4

Ensembl Gene ID:

ENSAPLG00000014787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015477

14267045 - 14275998

8954

ENSAPLT00000047253

14268309 - 14275998

7690