Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_1440124_1483286_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1440124 - 1483286

Intron Length:

43163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTATGTGAA

5'SS Class:

major

3'SS Sequence:

TTTATAATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTTTTTATAATT

Flanking Amino Acid:

MCMHDYTLTMYFQQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

72.3

32.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.1

0.7

0.9

74.3

39.2

Minor 5ss

40.5

-1.1

3.2

52.6

44.9

Minor BPS

64.2

0.52

1.5

80.97

34.8

Associated Gene:

Gene:

GABRB2

Ensembl Gene ID:

ENSAPLG00000013041

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013571

1339234 - 1483298

144065