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Intron Name: Anas_platyrhynchos_platyrhynchos_14_14465140_14465463_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
14465140 - 14465463

Intron Length:
324

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GTG|GTAAGTACT

5'SS Class:
strong_major

3'SS Sequence:
GTCTTGTTCATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTAAT

U12 Branch Point Sequence:
AGCAGTTTAATG

Flanking Amino Acid:
GGRGRGGRGGGQGSANYGKT

Intron Amino Acid Position:
291

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
90.2
0.95
0.8
86.2
29.2

Major BPS
81.8
0.79
1.1
84
34.5

Major PPT
73.3
0.53
0.9
68
37.7

Minor 5ss
38.5
-1.3
2.8
49.8
40.3

Minor BPS
46.7
-0.3
1.8
46.61
40.9

Associated Gene:

Gene:
HNRNPAB

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14465055 - 14471434
6380