Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_14465371_14465463_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14465371 - 14465463

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTTCTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TTCCCTTCTATA

Flanking Amino Acid:

GGRGRGGRGGAQSQNWNQGY

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

86.2

29.2

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

80.9

0.69

0.7

76.3

25.9

Minor 5ss

38.5

-1.3

2.8

49.8

40.3

Minor BPS

47.6

-0.1

1.8

60.55

39.6

Associated Gene:

Gene:

HNRNPAB

Ensembl Gene ID:

ENSAPLG00000014040

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014634

14446760 - 14471434

24675