Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_14557652_14559490_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14557652 - 14559490

Intron Length:

1839

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGAGTT

5'SS Class:

major

3'SS Sequence:

TTTCTCTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAG

U12 Branch Point Sequence:

AGGCTGCTAAGT

Flanking Amino Acid:

PSGDEEGSNNQNDVIEDNDS

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

36.4

Major BPS

55.4

0.13

1.6

63.6

42.5

Major PPT

86.5

0.82

0.6

85.7

21.5

Minor 5ss

38.6

-1.3

3.6

43.4

Minor BPS

38.1

-0.8

2.3

52.69

42.1

Associated Gene:

Gene:

FAM13B

Ensembl Gene ID:

ENSAPLG00000013261

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033422

14542464 - 14576481

34018

ENSAPLT00000013833

14542464 - 14576622

34159

ENSAPLT00000035829

14542464 - 14576622

34159