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Intron Name: Anas_platyrhynchos_platyrhynchos_14_14559627_14559859_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14559627 - 14559859

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTGTAT

U12 Branch Point Sequence:

CTCTCCTTCACA

Flanking Amino Acid:

TVTEEEESVQVLALPSAQVK

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

71.2

34.5

Major BPS

59.2

0.23

1.4

61.1

45.5

Major PPT

80.6

0.69

0.7

75.1

Minor 5ss

24.3

-3

3.1

29.7

43.1

Minor BPS

0.56

1.8

74.7

43.3

Associated Gene:

Gene:

FAM13B

Ensembl Gene ID:

ENSAPLG00000013261

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033422

14542464 - 14576481

34018

ENSAPLT00000013833

14542464 - 14576622

34159

ENSAPLT00000035829

14542464 - 14576622

34159