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Intron Name: Anas_platyrhynchos_platyrhynchos_14_14570433_14570812_F


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
14570433 - 14570812

Intron Length:
380

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAACATA

5'SS Class:
strong_major

3'SS Sequence:
ATTCTTCTGACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAT

U12 Branch Point Sequence:
TTTTTTTTGATT

Flanking Amino Acid:
VERCLPEDIKKMTKDHLVEE

Intron Amino Acid Position:
714

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.8
0.77
0.9
80.4
34.2

Major BPS
96.4
1.15
0.6
85.7
34.9

Major PPT
76.8
0.6
1
73
36.8

Minor 5ss
42.3
-0.8
3
57.2
47.1

Minor BPS
77.3
0.94
1
89.84
27.4

Associated Gene:

Gene:
FAM13B

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14542464 - 14576622
34159

14542464 - 14576481
34018

14542464 - 14576622
34159