Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_14575257_14576357_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14575257 - 14576357

Intron Length:

1101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTTA

5'SS Class:

major

3'SS Sequence:

CTTCTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAA

U12 Branch Point Sequence:

TTTTCCTGAAAC

Flanking Amino Acid:

FEEEFYQQNGRNVQKEDRVP

Intron Amino Acid Position:

893

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

77.9

32.4

Major BPS

69.6

0.49

59.5

Major PPT

91.6

0.93

0.6

86.9

23.9

Minor 5ss

46.2

-0.4

2.4

58.8

45.7

Minor BPS

75.6

0.78

1.5

85.18

32.4

Associated Gene:

Gene:

FAM13B

Ensembl Gene ID:

ENSAPLG00000013261

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035829

14542464 - 14576622

34159

ENSAPLT00000033422

14542464 - 14576481

34018

ENSAPLT00000013833

14542464 - 14576622

34159