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Intron Name: Anas_platyrhynchos_platyrhynchos_14_14580753_14581224_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14580753 - 14581224

Intron Length:

472

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

ATTTGTGTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAA

U12 Branch Point Sequence:

TGTTGCTGTATT

Flanking Amino Acid:

QSSVSRAEFQQLLGYTAELE

Intron Amino Acid Position:

546

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

79.3

34.5

Major BPS

69.1

0.48

0.9

69.6

26.6

Major PPT

70.3

0.46

62.2

43.8

Minor 5ss

40.8

-1

3.4

63.8

41.6

Minor BPS

48.5

-0

2.2

73.51

43.2

Associated Gene:

Gene:

PKD2L2

Ensembl Gene ID:

ENSAPLG00000012989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013541

14580635 - 14591906

11272