Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_14682947_14683715_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

14682947 - 14683715

Intron Length:

769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCAAAC

U12 Branch Point Sequence:

AACTTTCTACTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.9

90.9

28.7

Major BPS

58.6

0.21

28.4

Major PPT

82.1

0.72

0.8

79.5

32.5

Minor 5ss

40.3

-1.1

3.2

59.2

45.4

Minor BPS

-0.3

1.8

59.02

Associated Gene:

Gene:

KLHL3

Ensembl Gene ID:

ENSAPLG00000000978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026028

14682898 - 14716920

34023