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Intron Name: Anas_platyrhynchos_platyrhynchos_14_14686840_14691615_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
14686840 - 14691615

Intron Length:
4776

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACTGCGC

5'SS Class:
major

3'SS Sequence:
AAATGCTTTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAA

U12 Branch Point Sequence:
TCCTTTTGAAAT

Flanking Amino Acid:
CSPYFCAMFTGDMSESKAKK

Intron Amino Acid Position:
80

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.8
0.4
1.1
51.7
45.2

Major BPS
87.2
0.92
0.8
77.7
37.1

Major PPT
71.6
0.49
1
66.6
44

Minor 5ss
30.1
-2.3
3.4
42.5
44.3

Minor BPS
54.6
0.22
1.5
69.04
42.2

Associated Gene:

Gene:
KLHL3

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14683353 - 14717547
34195

14682898 - 14716920
34023

14676523 - 14717547
41025