Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_14714828_14716217_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14714828 - 14716217

Intron Length:

1390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGGCC

5'SS Class:

major

3'SS Sequence:

CTCTGTTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

GTTTGGCTAATG

Flanking Amino Acid:

ADMSTRRSGAGVGVLSGLLY

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

60.9

39.7

Major BPS

73.1

0.58

73.8

32.3

Major PPT

75.1

0.56

71.9

Minor 5ss

29.5

-2.4

3.6

42.4

44.6

Minor BPS

42.7

-0.6

2.6

56.5

45.1

Associated Gene:

Gene:

KLHL3

Ensembl Gene ID:

ENSAPLG00000000978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026148

14683353 - 14717547

34195

ENSAPLT00000026028

14682898 - 14716920

34023

ENSAPLT00000001242

14676523 - 14717547

41025