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Intron Name: Anas_platyrhynchos_platyrhynchos_14_14789214_14789805_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14789214 - 14789805

Intron Length:

592

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CATTATATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCATCCATTATA

Flanking Amino Acid:

EWCYCFQKPGGLPCQNEMNR

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.6

34.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

73.9

0.54

0.9

70.9

39.1

Minor 5ss

36.6

-1.5

2.9

46.4

44.2

Minor BPS

51.5

0.04

1.9

64.9

41.3

Associated Gene:

Gene:

SPOCK1

Ensembl Gene ID:

ENSAPLG00000002554

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002565

14782111 - 15063055

280945