Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_1497073_1497731_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1497073 - 1497731

Intron Length:

659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TCCCCTTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

69.8

42.4

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

86.6

0.82

0.9

86.9

31.1

Minor 5ss

30.6

-2.2

3.3

40.1

45.6

Minor BPS

69.9

0.7

1.2

76.64

40.8

Associated Gene:

Gene:

GABRB2

Ensembl Gene ID:

ENSAPLG00000013041

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022851

1339234 - 1497996

158763