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Intron Name: Anas_platyrhynchos_platyrhynchos_14_1497073_1497878_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1497073 - 1497878

Intron Length:

806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TCCCCTTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

69.9

41.1

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

86.6

0.82

0.9

86.9

31.1

Minor 5ss

29.8

-2.3

3.3

38.5

46.6

Minor BPS

69.9

0.7

1.2

76.64

40.8

Associated Gene:

Gene:

GABRB2

Ensembl Gene ID:

ENSAPLG00000013041

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041017

1339234 - 1574652

235419

ENSAPLT00000037347

1337553 - 1497996

160444

ENSAPLT00000029832

1339234 - 1497996

158763