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Intron Name: Anas_platyrhynchos_platyrhynchos_14_15226051_15243216_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15226051 - 15243216

Intron Length:

17166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTGCCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAATAT

U12 Branch Point Sequence:

CACAGCTGAATA

Flanking Amino Acid:

RLANIETEFKNDYRKLSMQC

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

80.3

28.1

Major BPS

52.3

0.06

1.3

49.4

44.5

Major PPT

77.7

0.62

0.8

77.2

31.6

Minor 5ss

40.6

-1.1

2.8

52.6

44.6

Minor BPS

45.1

-0.3

1.9

49.78

41.5

Associated Gene:

Gene:

TRPC7

Ensembl Gene ID:

ENSAPLG00000002677

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041656

15197244 - 15287046

89803

ENSAPLT00000030094

15220032 - 15287046

67015

ENSAPLT00000021897

15197244 - 15287046

89803

ENSAPLT00000002732

15197244 - 15287046

89803

ENSAPLT00000044088

15218360 - 15287046

68687