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Intron Name: Anas_platyrhynchos_platyrhynchos_14_15261638_15266962_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15261638 - 15266962

Intron Length:

5325

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

GGCCTTTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TGTTGGTTAAAC

Flanking Amino Acid:

TELLIMKWVLGMIWSECKEI

Intron Amino Acid Position:

454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

74.1

38.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

70.9

0.47

0.9

64.8

36.4

Minor 5ss

38.3

-1.3

2.8

40.3

45.6

Minor BPS

48.5

-0.1

2.5

68.33

42.9

Associated Gene:

Gene:

TRPC7

Ensembl Gene ID:

ENSAPLG00000002677

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030094

15220032 - 15287046

67015

ENSAPLT00000021897

15197244 - 15287046

89803

ENSAPLT00000002732

15197244 - 15287046

89803

ENSAPLT00000044088

15218360 - 15287046

68687

ENSAPLT00000041656

15197244 - 15287046

89803