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Intron Name: Anas_platyrhynchos_platyrhynchos_14_15269362_15275690_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15269362 - 15275690

Intron Length:

6329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

CTTTATTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

TTTGCTTTATTT

Flanking Amino Acid:

LGAKYNPAFTTVEESFKTLF

Intron Amino Acid Position:

620

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

74.9

35.3

Major BPS

0.57

1.2

41.2

Major PPT

0.81

0.7

84.8

29.6

Minor 5ss

32.9

-1.9

2.6

37.5

32.2

Minor BPS

65.7

0.57

1.7

83.14

Associated Gene:

Gene:

TRPC7

Ensembl Gene ID:

ENSAPLG00000002677

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030094

15220032 - 15287046

67015

ENSAPLT00000021897

15197244 - 15287046

89803

ENSAPLT00000002732

15197244 - 15287046

89803

ENSAPLT00000044088

15218360 - 15287046

68687

ENSAPLT00000041656

15197244 - 15287046

89803