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Intron Name: Anas_platyrhynchos_platyrhynchos_14_15349790_15351027_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15349790 - 15351027

Intron Length:

1238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCATTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TGATTTATAATA

Flanking Amino Acid:

MCTIRMSFVKGWGAEYHRQD

Intron Amino Acid Position:

419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

32.6

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

84.1

0.77

0.7

79.9

32.1

Minor 5ss

30.9

-2.2

3.2

46.4

Minor BPS

55.8

0.18

1.5

65.34

34.9

Associated Gene:

Gene:

SMAD5

Ensembl Gene ID:

ENSAPLG00000003593

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038115

15349646 - 15378584

28939

ENSAPLT00000003717

15349313 - 15378584

29272