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Intron Name: Anas_platyrhynchos_platyrhynchos_14_15356238_15357430_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15356238 - 15357430

Intron Length:

1193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CTTGCTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTGTTTGCTT

Flanking Amino Acid:

PYHYKRVESPVLPPVLVPRH

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.5

0.82

0.8

84.1

30.8

Minor 5ss

49.9

-0

2.4

66.4

45.1

Minor BPS

42.8

-0.4

3.6

78.01

39.5

Associated Gene:

Gene:

SMAD5

Ensembl Gene ID:

ENSAPLG00000003593

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038115

15349646 - 15378584

28939

ENSAPLT00000003717

15349313 - 15378584

29272