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Intron Name: Anas_platyrhynchos_platyrhynchos_14_1541976_1542204_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1541976 - 1542204

Intron Length:

229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

CGGGCGCTGACG

Flanking Amino Acid:

LLIVWLCVVVSMEKALGGQG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.4

38.7

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

82.5

0.73

0.7

76.4

25.6

Minor 5ss

30.2

-2.3

3.3

36.8

47.7

Minor BPS

38.4

-1

2.3

39.44

44.4

Associated Gene:

Gene:

GABRA6

Ensembl Gene ID:

ENSAPLG00000013172

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013760

1541938 - 1560962

19025