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Intron Name: Anas_platyrhynchos_platyrhynchos_14_1542608_1543870_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1542608 - 1543870

Intron Length:

1263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

TCATTTTGCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TCATGCATAATT

Flanking Amino Acid:

SFGPVSDVEMEYTMDVFFRQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

70.2

35.6

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

71.4

0.48

0.9

68.3

37.3

Minor 5ss

30.6

-2.2

3.5

39.1

40.7

Minor BPS

53.2

0.18

73.52

43.5

Associated Gene:

Gene:

GABRA6

Ensembl Gene ID:

ENSAPLG00000013172

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013760

1541938 - 1560962

19025