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Intron Name: Anas_platyrhynchos_platyrhynchos_14_15472208_15472728_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15472208 - 15472728

Intron Length:

521

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TCATCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

GCTTCCTGACAT

Flanking Amino Acid:

IDDGVQIRGSGYCVKLVCIH

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.1

1.16

0.7

89.2

28.7

Major BPS

0.5

1.1

71.2

35.2

Major PPT

84.3

0.77

0.8

76.6

37.2

Minor 5ss

25.7

-2.8

3.6

35.8

41.1

Minor BPS

51.9

0.14

1.9

71.05

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004923

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005087

15469338 - 15474839

5502