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Intron Name: Anas_platyrhynchos_platyrhynchos_14_15484751_15485430_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

15484751 - 15485430

Intron Length:

680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

AATGGCTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

70.9

0.47

62.5

43.4

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

67.8

0.64

1.5

82.83

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005159

15477979 - 15485530

7552