Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_15504732_15504826_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15504732 - 15504826

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTCCA

5'SS Class:

major

3'SS Sequence:

TTTTCATTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

AGAATTTTAACG

Flanking Amino Acid:

SCPCSETAASPCSCLPIPEP

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

64.5

41.4

Major BPS

100

1.24

0.5

100

Major PPT

91.2

0.93

0.7

89.3

26.1

Minor 5ss

36.5

-1.5

2.9

43.6

43.3

Minor BPS

57.1

0.09

1.4

55.86

39.2

Associated Gene:

Gene:

SLC25A48

Ensembl Gene ID:

ENSAPLG00000005100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043827

15502166 - 15526136

23971