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Intron Name: Anas_platyrhynchos_platyrhynchos_14_15697112_15700044_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

15697112 - 15700044

Intron Length:

2933

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCCA

5'SS Class:

strong_major

3'SS Sequence:

TTTACCATTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TTAATATAAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

71.6

40.2

Major BPS

74.5

0.61

79.6

29.1

Major PPT

70.3

0.46

1.1

73.2

36.1

Minor 5ss

38.2

-1.3

48.7

Minor BPS

48.7

-0

1.9

70.3

40.7

Associated Gene:

Gene:

MACROH2A1

Ensembl Gene ID:

ENSAPLG00000005243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027979

15697052 - 15739399

42348