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Intron Name: Anas_platyrhynchos_platyrhynchos_14_15702152_15715943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15702152 - 15715943

Intron Length:

13792

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

GTGTAATTAAAA

Flanking Amino Acid:

YMAAVLEYLTAEILELAGNA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

80.5

34.9

Major BPS

73.8

0.59

0.9

26.8

Major PPT

88.1

0.86

0.6

81.6

30.5

Minor 5ss

44.9

-0.5

3.2

63.2

43.8

Minor BPS

50.2

1.9

64.2

41.2

Associated Gene:

Gene:

MACROH2A1

Ensembl Gene ID:

ENSAPLG00000005243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027979

15697052 - 15739399

42348

ENSAPLT00000023726

15701951 - 15739399

37449

ENSAPLT00000005452

15697052 - 15739524

42473

ENSAPLT00000046118

15697052 - 15734838

37787

ENSAPLT00000042997

15697052 - 15739524

42473